Well I go to Disneyland all the time (I love that place) and obviously my favorite ride there is Temple of the Forbidden Eye. Everything about it is just awesome. The design, the detail, the interactive elements in the queue, the pyro effects, the ride itself... simply spectacular. Some in-ride effects are starting to look a bit creaky though. Hopefully it will get a refurbishment soon.
Summer 2008 they had an Indy show geared towards young kids which was fun/funny to watch. They also had the "random acts of Indy" thing going on where Indy would pop up in Adventureland at various times of the day to fight a villain called the "desert thief". That was cool.
I've seen videos of the Florida stunt show on youtube. It looks pretty cool, but I much prefer having the ride!